下面是i2b2数据库设置教程中用于创建一组表并为特定数据库加载数据的命令。我以前只在(SSMS)中手动运行*.sql命令(在一个新的查询窗口中)。这是必须从Java运行的东西,还是可以直接在某个命令提示符中执行呢?如果是的话,你能帮我做必要的步骤吗?(我需要引用第三方程序集吗?我猜我需要配置我的数据库连接字符串等等)
ant –f data_build.xml create_workdata_tables_release_1-6
ant –f data_build.xml db_workdata_load_data在盘旋在"ant“(StackOverflow标记)之后,它似乎是某种Java。
Apache Ant (以前的Jakarta )是一个声明式的、基于XML的Java项目构建工具。它为执行最常见的构建操作提供了一组丰富的标准任务,例如用javac编译、构建归档文件和运行测试。Ant的功能可以通过自定义任务和宏来扩展。
我试图在Windows中的命令提示符中运行这个命令,但得到了一个错误。
C:\Source\i2b2\i2b2createdb-1602\edu.harvard.i2b2.data\Release_1-6\NewInstall\Metadata>ant -f data_build.xml create_crcdata_tables_release_1-6
'ant' is not recognized as an internal or external command,
operable program or batch file.我看到了XML文件中列出的实际*.sql文件,我猜它们是以特定的方式排序的,这样关联的(包含主键)首先将数据加载到它们中,桥/父/所有者/基表(包含外键)最后运行,因为它们依赖于关联的表。如果所有其他命令都失败了,我可能可以按照所列的顺序直接从SSMS运行这些命令,但我很想尝试一下这个"ant“命令。
安装说明:
http://www.i2b2.org
下载"i2b2createdb-1602.zip“并解压。
下载"i2b2core-doc-1602.zip“并提取(使用这些PDF文档获取安装说明)
=====================================
看来,我必须定义XML文件中定义的变量。
<?xml version="1.0" encoding="UTF-8"?>
<!--
$Id: data_build.xml,v 1.5 2010/06/04 15:33:06 lcp5 Exp $
-->
<project name="Ontology/Metadata data" basedir=".">
<property environment="env" />
<property file="./db.properties" />
<!-- =================================================================== -->
<!-- INIT -->
<!-- =================================================================== -->
<target name="init" description="Prepare for build">
<path id="classpath">
<pathelement location="../ojdbc14.jar" />
<pathelement location="../sqljdbc.jar"/>
</path>
</target>
<!-- =================================================================== -->
<!-- DATABASE SETUP TARGETS -->
<!-- =================================================================== -->
<target name="db_create_user" depends="init">
<sql driver="${db.driver}" url="${db.url}" userid="${db.username}" password="${db.password}" classpathref="classpath" onerror="continue" print="true">
CREATE USER i2b2metadata IDENTIFIED BY i2b2metadata;
</sql>
</target>
<target name="create_metadata_tables_release_1-6" depends="init">
<sql driver="${db.driver}" url="${db.url}" userid="${db.username}" password="${db.password}" classpathref="classpath" onerror="continue" print="true">
<transaction src="./scripts/create_${db.type}_i2b2metadata_tables.sql" />
</sql>
</target>
<target name="db_metadata_load_data" depends="init">
<echo message="Loading metadata -- may take a while; over 10 min" />
<sql driver="${db.driver}" url="${db.url}" userid="${db.username}" password="${db.password}" classpathref="classpath" onerror="continue" print="true">
<transaction src="./${db.project}/scripts/schemes_insert_data.sql" />
<transaction src="./${db.project}/scripts/table_access_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/birn_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/custom_meta_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_demographics_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_diagnoses_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_expressions_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_labtests_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_medications_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_modifiers_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_procedures_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_providers_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_reports_insert_data.sql" />
<transaction src="./${db.project}/scripts/${db.type}/i2b2_metadata_visitDetails_insert_data.sql" />
</sql>
</target>
</project>=====================================
2012年6月5日@6:52上午:
设置:
的新数据库
安装Oracle:
安装Apache:
http://ant.apache.org/
C:\source_code\apache-ant-1.8.3\或%ANT_HOME%环境变量中使用的目录
Java和Ant:环境变量设置
Windows 7>控制面板>系统>单击“环境变量”按钮>
(别忘了尾随的"\") *_MacGyver 5/6/2012 @2:45下午-忽略这个.删除后面的"\“字符..。参见下面question_中的评论
在“系统变量”部分,单击“添加”>变量名称:JAVA_HOME变量值:C:\Program Files\Java\jdk1.7.0_02\
在“系统变量”部分,单击“添加”>变量名称:ANT_HOME变量值:C:\source_code\apache-ant-1.8.3\
在“系统变量”部分,单击“路径”环境变量,单击“编辑”>变量名称:Path变量值:{value before editing};%JAVA_HOME%\bin;%ANT_HOME%\bin;。
Administrator)
C:\source_code\i2b2\i2b2createdb-1602\edu.harvard.i2b2.data\Release_1-6\NewInstall\{folder}\db.properties文件都具有适当的值。替换"?“具有正确值的."db.properties“文件:
db.type=sqlserver
db.username=?
db.password=?
db.server=LAPTOP-INSPIRON\SQLEXPRESS
db.driver=com.microsoft.sqlserver.jdbc.SQLServerDriver
db.url=jdbc:sqlserver:LAPTOP-INSPIRON\SQLEXPRESS;databasename=i2b2_demo
db.project=demo获取此错误:
C:\source_code\i2b2\i2b2createdb-1602\edu.harvard.i2b2.data\Release_1-6\NewInsta
ll\Crcdata>ant -f data_build.xml upgrade_metadata_tables_release_1-6
Buildfile: build.xml does not exist!
Build failed=====================================
2012年6月5日@7:33找到了这个错误页面..。
安装Ant:
单击以下命令:http://ant.apache.org/manual/index.html
或者..。
导航到http://ant.apache.org/ >手动>安装Apache > Installing >
C:\source_code\apache-ant-1.8.3>ant -version
Apache Ant(TM) version 1.8.3 compiled on February 26 2012
C:\source_code\apache-ant-1.8.3>ant -f fetch.xml
Buildfile: C:\source_code\apache-ant-1.8.3\fetch.xml
pick-dest:
BUILD FAILED
C:\source_code\apache-ant-1.8.3\fetch.xml:70: ERROR
Set -Ddest=LOCATION on the command line
-Ddest=user user lib dir C:\Users\Keith/.ant/lib
-Ddest=system ant lib dir C:\source_code\apache-ant-1.8.3/lib
-Ddest=optional optional dir ${basedir}/lib/optional (for Ant developers)
Total time: 0 seconds
C:\source_code\apache-ant-1.8.3>build install
'build' is not recognized as an internal or external command,
operable program or batch file..然后注意到我漏掉了命令中的参数。但还是失败了!
C:\source_code\apache-ant-1.8.3>ant -f fetch.xml -Ddest=system
Buildfile: C:\source_code\apache-ant-1.8.3\fetch.xml
pick-dest:
[echo] Downloading to C:\source_code\apache-ant-1.8.3\lib
probe-m2:
download-m2:
[echo] Downloading to C:\source_code\apache-ant-1.8.3\lib
[get] Getting: http://repo1.maven.org/maven2/org/apache/maven/maven-artifa
ct-ant/2.0.4/maven-artifact-ant-2.0.4-dep.jar
[get] To: C:\source_code\apache-ant-1.8.3\lib\maven-artifact-ant-2.0.4-dep
.jar
[get] ...................................
dont-validate-m2-checksum:
validate-m2-checksum:
checksum-mismatch:
checksum-match:
get-m2:
macros:
init:
logging:
[artifact:dependencies] Downloading: log4j/log4j/1.2.14/log4j-1.2.14.pom
[artifact:dependencies] Transferring 2K
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mons-logging-api-1.1.jar
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junit:
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xml:
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m
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[artifact:dependencies] Transferring 1K
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[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
networking:
[artifact:dependencies] Downloading: commons-net/commons-net/1.4.1/commons-net-1
.4.1.pom
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[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
regexp:
[artifact:dependencies] Downloading: regexp/regexp/1.3/regexp-1.3.pom
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[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
antlr:
[artifact:dependencies] Downloading: antlr/antlr/2.7.7/antlr-2.7.7.pom
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[artifact:dependencies] Transferring 434K
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bcel:
[artifact:dependencies] Downloading: bcel/bcel/5.1/bcel-5.1.pom
[artifact:dependencies] Transferring 0K
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[artifact:dependencies] Transferring 503K
[copy] Copying 2 files to C:\source_code\apache-ant-1.8.3\lib
jdepend:
[artifact:dependencies] Downloading: jdepend/jdepend/2.9.1/jdepend-2.9.1.pom
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bsf:
[artifact:dependencies] Downloading: bsf/bsf/2.4.0/bsf-2.4.0.pom
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[copy] Copying 2 files to C:\source_code\apache-ant-1.8.3\lib
debugging:
[artifact:dependencies] Downloading: which/which/1.0/which-1.0.pom
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jruby:
[artifact:dependencies] Downloading: org/jruby/jruby/0.9.8/jruby-0.9.8.pom
[artifact:dependencies] Transferring 5K
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[copy] Copying 4 files to C:\source_code\apache-ant-1.8.3\lib
beanshell:
[artifact:dependencies] Downloading: org/beanshell/bsh/2.0b4/bsh-2.0b4.pom
[artifact:dependencies] Transferring 1K
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.pom
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[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
rhino:
[artifact:dependencies] Downloading: rhino/js/1.6R7/js-1.6R7.pom
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[artifact:dependencies] Transferring 794K
[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
script:
javamail:
[artifact:dependencies] Downloading: javax/mail/mail/1.4/mail-1.4.pom
[artifact:dependencies] Transferring 0K
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[artifact:dependencies] Transferring 379K
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1.1.jar
[artifact:dependencies] Transferring 61K
[copy] Copying 2 files to C:\source_code\apache-ant-1.8.3\lib
jspc:
[artifact:dependencies] Downloading: tomcat/jasper-compiler/4.1.36/jasper-compil
er-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository remote
(http://repo1.maven.org/maven2/)
[artifact:dependencies] Downloading: tomcat/jasper-compiler/4.1.36/jasper-compil
er-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository central
(http://repo1.maven.org/maven2)
[artifact:dependencies] Downloading: tomcat/jasper-compiler/4.1.36/jasper-compil
er-4.1.36.jar
[artifact:dependencies] Transferring 179K
[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
[artifact:dependencies] Downloading: tomcat/jasper-runtime/4.1.36/jasper-runtime
-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository remote
(http://repo1.maven.org/maven2/)
[artifact:dependencies] Downloading: tomcat/jasper-runtime/4.1.36/jasper-runtime
-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository central
(http://repo1.maven.org/maven2)
[artifact:dependencies] Downloading: tomcat/jasper-runtime/4.1.36/jasper-runtime
-4.1.36.jar
[artifact:dependencies] Transferring 70K
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[artifact:dependencies] Transferring 76K
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jai:
[artifact:dependencies] Downloading: javax/media/jai-core/1.1.3/jai-core-1.1.3.p
om
[artifact:dependencies] Transferring 1K
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ar
[artifact:dependencies] Transferring 1856K
[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
[artifact:dependencies] Downloading: com/sun/media/jai-codec/1.1.3/jai-codec-1.1
.3.pom
[artifact:dependencies] Transferring 1K
[artifact:dependencies] Downloading: com/sun/media/jai-codec/1.1.3/jai-codec-1.1
.3.jar
[artifact:dependencies] Transferring 252K
[copy] Copying 1 file to C:\source_code\apache-ant-1.8.3\lib
nonm2-macros:
init-no-m2:
init-cache:
-setup-temp-cache:
[mkdir] Created dir: C:\Users\{user name}\.ant\tempcache
-fetch-netrexx:
-fetch-netrexx-no-commons-net:
[get] Getting: ftp://ftp.software.ibm.com/software/awdtools/netrexx/NetRex
x.zip
[get] To: C:\Users\{user name}\.ant\tempcache\NetRexx.zip
[get] Error opening connection java.net.SocketException: Permission denied
: recv failed
[get] Error opening connection java.net.SocketException: Connection reset
[get] Error opening connection java.net.SocketException: Connection reset
[get] Can't get ftp://ftp.software.ibm.com/software/awdtools/netrexx/NetRe
xx.zip to C:\Users\{user name}\.ant\tempcache\NetRexx.zip
BUILD FAILED
C:\source_code\apache-ant-1.8.3\fetch.xml:328: Can't get ftp://ftp.software.ibm.
com/software/awdtools/netrexx/NetRexx.zip to C:\Users\{user name}\.ant\tempcache\NetRe
xx.zip
Total time: 49 seconds=====================================
2012年6月5日@ 1:33pm更新
我读了这个片段,意识到我把"\“放在了两个环境变量(ANT_HOME & JAVA_HOME)的末尾。我想你不能这么做。是我的错。
视窗备注:
“ant.bat脚本使用了三个环境变量-- ANT_HOME、CLASSPATH和JAVA_HOME。确保设置了ANT_HOME和JAVA_HOME变量,并且它们没有引号(或者”或"),并且没有以\或/结尾。CLASSPATH应该是未设置或空的。“
好像以前效果更好。注意,它在下面做的并不多。它还在失败。或者它不需要它们,因为它是在前一次运行时发现的。
C:\Windows\system32>cd %ANT_HOME%
C:\source_code\apache-ant-1.8.3>ant -f fetch.xml -Ddest=system
Buildfile: C:\source_code\apache-ant-1.8.3\fetch.xml
pick-dest:
[echo] Downloading to C:\source_code\apache-ant-1.8.3\lib
probe-m2:
download-m2:
dont-validate-m2-checksum:
validate-m2-checksum:
checksum-mismatch:
checksum-match:
get-m2:
macros:
init:
logging:
junit:
xml:
networking:
regexp:
antlr:
bcel:
jdepend:
bsf:
debugging:
jruby:
beanshell:
rhino:
script:
javamail:
jspc:
[artifact:dependencies] Downloading: tomcat/jasper-compiler/4.1.36/jasper-compil
er-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository remote
(http://repo1.maven.org/maven2/)
[artifact:dependencies] Downloading: tomcat/jasper-compiler/4.1.36/jasper-compil
er-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository central
(http://repo1.maven.org/maven2)
[artifact:dependencies] Downloading: tomcat/jasper-runtime/4.1.36/jasper-runtime
-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository remote
(http://repo1.maven.org/maven2/)
[artifact:dependencies] Downloading: tomcat/jasper-runtime/4.1.36/jasper-runtime
-4.1.36.pom
[artifact:dependencies] [WARNING] Unable to get resource from repository central
(http://repo1.maven.org/maven2)
jai:
nonm2-macros:
init-no-m2:
init-cache:
-setup-temp-cache:
-fetch-netrexx:
[ftp] getting files
BUILD FAILED
C:\source_code\apache-ant-1.8.3\fetch.xml:325: The following error occurred whil
e executing this line:
C:\source_code\apache-ant-1.8.3\fetch.xml:144: java.net.SocketException: Permiss
ion denied: recv failed
at java.net.SocketInputStream.socketRead0(Native Method)
at java.net.SocketInputStream.read(SocketInputStream.java:150)
at java.net.SocketInputStream.read(SocketInputStream.java:121)
at java.io.BufferedInputStream.read1(BufferedInputStream.java:273)
at java.io.BufferedInputStream.read(BufferedInputStream.java:334)
at java.io.BufferedInputStream.fill(BufferedInputStream.java:235)
at java.io.BufferedInputStream.read(BufferedInputStream.java:254)
at org.apache.commons.net.telnet.TelnetInputStream.__read(TelnetInputStr
eam.java:114)
at org.apache.commons.net.telnet.TelnetInputStream.run(TelnetInputStream
.java:535)
at java.lang.Thread.run(Thread.java:722)
Total time: 4 seconds发布于 2012-05-07 04:59:32
Apache在显示实际堆栈跟踪方面做得不太好。因此,要解决Ant问题,也可以用Java进行调试。在我的示例中,我能够通过运行这段代码来排除故障。您需要将"sqljdbc_auth.dll“放置到run目录中,才能使其工作。这假设您已经允许i2b2用户的权限。
import java.sql.*;
public class TestConnection
{
public static void main(String[] args)
{
DB db = new DB();
db.dbConnect("jdbc:sqlserver://LAPTOP-INSPIRON\\SQLEXPRESS:1435;databaseName=i2b2_demo;integratedSecurity=true;","i2b2","i2b2");
}
}
class DB
{
public DB() {}
public void dbConnect(String db_connect_string, String db_userid, String db_password)
{
try
{
Connection conn = DriverManager.getConnection(db_connect_string, db_userid, db_password);
System.out.println("connected");
}
catch (Exception e)
{
e.printStackTrace();
}
}
};构建本体数据库所必需的i2b2步骤:
(1)所有程序> Server 2008 R2 Express >配置工具> Server配置管理器>右键单击instance /IP协议>选择Enable
(2) SSCM - TCP/IP属性> IP地址(选项卡)> set IP2 (节)> IP地址到本地IP地址(例如,192.168.1.101)
(3) SSCM - TCP/IP属性> IP地址(选项卡)> IPAll (节)>删除动态端口。
(4) SSCM - TCP/IP属性> IP地址(选项卡)> IPAll (节)>添加静态端口1435 (缺省值为1433,但其中有两个实例)。
(5) JDBC -如果连接到Server 2008,则不要为JDBC使用apache ant jar文件。相反,下载JDBC版本4并使用"sqljdbc.jar“,然后在build.xml类路径jar列表中使用它。
(6) JDBC -在这些文件夹中放置"sqljdbc_auth.dll“(在ant目录中):
C:\source_code\i2b2\i2b2createdb-1602\edu.harvard.i2b2.data\Release_1-6\NewInstall\{folder}\(7) JDBC -如果您从另一台计算机连接到此SQL框,请创建防火墙传入规则以允许端口(1433、1434或1435 .或者任何你选择的) TCP。
(8) JDBC连接字符串
db.url=jdbc:sqlserver://LAPTOP-INSPIRON\\SQLEXPRESS:1435;databaseName=i2b2_demo;(9) Apache下载--如果选择使用二进制文件,则不需要调用"build“。在这种情况下,跳过10-12。如果您选择下载src文件,您将在运行"build“之前执行3项操作,否则它会说”生成失败“而不是”生成成功“。
(10)“构建安装”-从build.xml中的lite列表中删除了test-jar (原名为"data_build.xml")
<target name="dist-lite"
depends="jars,test-jar"
to
<target name="dist-lite"
depends="jars"(11)“构建安装”--在"lib“文件夹下添加一个名为”可选“的文件夹
(12)“建造安装”-以下是答案:
Workaround for Apache Ant Install Bug
(13)获取进程-运行"ant -f fetch.xml -Ddest=system“
(14) Ant命令-运行以下"ant _workdata_tables_Release1-6“。换句话说,不要使用-f。如果不想将"data_build.xml“重命名为"build.xml”,请使用-buildfile (而不是-f)参数和构建文件的路径和文件名。
(15)按照正确的顺序执行命令,以便正确地构建数据库。如果你不这么做,就重新开始。
FYI:如果我们使用Red和Red数据比较工具,这会容易得多。
发布于 2012-05-06 09:45:08
看起来Ant根本没有安装在您的计算机上。所以我认为你必须下载并安装它:
http://ant.apache.org/
http://ant.apache.org/manual/index.html
https://stackoverflow.com/questions/10469543
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